Draft genome sequence of Arthrospira platensis C1 (PCC9438)

Supapon Cheevadhanarak; Kalyanee Paithoonrangsarid; Peerada Prommeenate; Warunee Kaewngam; Apiluck Musigkain; Somvong Tragoonrung; Satoshi Tabata; Takakazu Kaneko; Jeerayut Chaijaruwanich; Duangjai Sangsrakru; Sithichoke Tangphatsornruang; Juntima Chanprasert; Sissades Thongsima; Kanthida Kusolmano; Wattana Jeamton; Sudarat Dulsawat; Amornpan Klanchui; Tayvich Vorapreeda; Vasunun Chumchua; Chiraphan Khannapho; Chinae Thammarongtham; Vethachai Plengvidhya; Sanjukta Subudhi; Apiradee Hongsthong; Marasri Ruengjitchatchawalya; Asawin Meechai; Jittisak Senachak; Morakot Tanticharoen

doi:10.4056/sigs.2525955

Draft genome sequence of Arthrospira platensis C1 (PCC9438)

Supapon Cheevadhanarak
, Kalyanee Paithoonrangsarid
, Peerada Prommeenate
, Warunee Kaewngam
, Apiluck Musigkain
, Somvong Tragoonrung
, Satoshi Tabata
, Takakazu Kaneko
, Jeerayut Chaijaruwanich
, Duangjai Sangsrakru
, Sithichoke Tangphatsornruang
, Juntima Chanprasert
, Sissades Thongsima
, Kanthida Kusolmano
, Wattana Jeamton
, Sudarat Dulsawat
, Amornpan Klanchui
, Tayvich Vorapreeda
, Vasunun Chumchua
, Chiraphan Khannapho

Chinae Thammarongtham, Vethachai Plengvidhya, Sanjukta Subudhi, Apiradee Hongsthong, Marasri Ruengjitchatchawalya, Asawin Meechai, Jittisak Senachak, Morakot Tanticharoen

K. Mongkut's Univ. Technol. Thonburi
National Science and Technology Development Agency (NSTDA)
Kazusa DNA Research Institute
Chiang Mai University

Research output: Contribution to journal › Article › peer-review

56 Citations (Scopus)

Abstract

Arthrospira platensis is a cyanobacterium that is extensively cultivated outdoors on a large commercial scale for consumption as a food for humans and animals. It can be grown in monoculture under highly alkaline conditions, making it attractive for industrial production. Here we describe the complete genome sequence of A. platensis C1 strain and its annotation. The A. platensis C1 genome contains 6,089,210 bp including 6,108 protein-coding genes and 45 RNA genes, and no plasmids. The genome information has been used for further comparative analysis, particularly of metabolic pathways, photosynthetic efficiency and barriers to gene transfer.

Original language	English
Pages (from-to)	43-53
Number of pages	11
Journal	Standards in Genomic Sciences
Volume	6
Issue number	1
DOIs	https://doi.org/10.4056/sigs.2525955
Publication status	Published - 2012
Externally published	Yes

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Cheevadhanarak, S., Paithoonrangsarid, K., Prommeenate, P., Kaewngam, W., Musigkain, A., Tragoonrung, S., Tabata, S., Kaneko, T., Chaijaruwanich, J., Sangsrakru, D., Tangphatsornruang, S., Chanprasert, J., Thongsima, S., Kusolmano, K., Jeamton, W., Dulsawat, S., Klanchui, A., Vorapreeda, T., Chumchua, V., ... Tanticharoen, M. (2012). Draft genome sequence of Arthrospira platensis C1 (PCC9438). Standards in Genomic Sciences, 6(1), 43-53. https://doi.org/10.4056/sigs.2525955

@article{96e49410f70d4798916db569077afd72,

title = "Draft genome sequence of Arthrospira platensis C1 (PCC9438)",

abstract = "Arthrospira platensis is a cyanobacterium that is extensively cultivated outdoors on a large commercial scale for consumption as a food for humans and animals. It can be grown in monoculture under highly alkaline conditions, making it attractive for industrial production. Here we describe the complete genome sequence of A. platensis C1 strain and its annotation. The A. platensis C1 genome contains 6,089,210 bp including 6,108 protein-coding genes and 45 RNA genes, and no plasmids. The genome information has been used for further comparative analysis, particularly of metabolic pathways, photosynthetic efficiency and barriers to gene transfer.",

author = "Supapon Cheevadhanarak and Kalyanee Paithoonrangsarid and Peerada Prommeenate and Warunee Kaewngam and Apiluck Musigkain and Somvong Tragoonrung and Satoshi Tabata and Takakazu Kaneko and Jeerayut Chaijaruwanich and Duangjai Sangsrakru and Sithichoke Tangphatsornruang and Juntima Chanprasert and Sissades Thongsima and Kanthida Kusolmano and Wattana Jeamton and Sudarat Dulsawat and Amornpan Klanchui and Tayvich Vorapreeda and Vasunun Chumchua and Chiraphan Khannapho and Chinae Thammarongtham and Vethachai Plengvidhya and Sanjukta Subudhi and Apiradee Hongsthong and Marasri Ruengjitchatchawalya and Asawin Meechai and Jittisak Senachak and Morakot Tanticharoen",

year = "2012",

doi = "10.4056/sigs.2525955",

language = "English",

volume = "6",

pages = "43--53",

journal = "Standards in Genomic Sciences",

issn = "1944-3277",

publisher = "BioMed Central Ltd.",

number = "1",

}

Cheevadhanarak, S, Paithoonrangsarid, K, Prommeenate, P, Kaewngam, W, Musigkain, A, Tragoonrung, S, Tabata, S, Kaneko, T, Chaijaruwanich, J, Sangsrakru, D, Tangphatsornruang, S, Chanprasert, J, Thongsima, S, Kusolmano, K, Jeamton, W, Dulsawat, S, Klanchui, A, Vorapreeda, T, Chumchua, V, Khannapho, C, Thammarongtham, C, Plengvidhya, V, Subudhi, S, Hongsthong, A, Ruengjitchatchawalya, M, Meechai, A, Senachak, J & Tanticharoen, M 2012, 'Draft genome sequence of Arthrospira platensis C1 (PCC9438)', Standards in Genomic Sciences, vol. 6, no. 1, pp. 43-53. https://doi.org/10.4056/sigs.2525955

TY - JOUR

T1 - Draft genome sequence of Arthrospira platensis C1 (PCC9438)

AU - Cheevadhanarak, Supapon

AU - Paithoonrangsarid, Kalyanee

AU - Prommeenate, Peerada

AU - Kaewngam, Warunee

AU - Musigkain, Apiluck

AU - Tragoonrung, Somvong

AU - Tabata, Satoshi

AU - Kaneko, Takakazu

AU - Chaijaruwanich, Jeerayut

AU - Sangsrakru, Duangjai

AU - Tangphatsornruang, Sithichoke

AU - Chanprasert, Juntima

AU - Thongsima, Sissades

AU - Kusolmano, Kanthida

AU - Jeamton, Wattana

AU - Dulsawat, Sudarat

AU - Klanchui, Amornpan

AU - Vorapreeda, Tayvich

AU - Chumchua, Vasunun

AU - Khannapho, Chiraphan

AU - Thammarongtham, Chinae

AU - Plengvidhya, Vethachai

AU - Subudhi, Sanjukta

AU - Hongsthong, Apiradee

AU - Ruengjitchatchawalya, Marasri

AU - Meechai, Asawin

AU - Senachak, Jittisak

AU - Tanticharoen, Morakot

PY - 2012

Y1 - 2012

N2 - Arthrospira platensis is a cyanobacterium that is extensively cultivated outdoors on a large commercial scale for consumption as a food for humans and animals. It can be grown in monoculture under highly alkaline conditions, making it attractive for industrial production. Here we describe the complete genome sequence of A. platensis C1 strain and its annotation. The A. platensis C1 genome contains 6,089,210 bp including 6,108 protein-coding genes and 45 RNA genes, and no plasmids. The genome information has been used for further comparative analysis, particularly of metabolic pathways, photosynthetic efficiency and barriers to gene transfer.

AB - Arthrospira platensis is a cyanobacterium that is extensively cultivated outdoors on a large commercial scale for consumption as a food for humans and animals. It can be grown in monoculture under highly alkaline conditions, making it attractive for industrial production. Here we describe the complete genome sequence of A. platensis C1 strain and its annotation. The A. platensis C1 genome contains 6,089,210 bp including 6,108 protein-coding genes and 45 RNA genes, and no plasmids. The genome information has been used for further comparative analysis, particularly of metabolic pathways, photosynthetic efficiency and barriers to gene transfer.

UR - https://www.scopus.com/pages/publications/84859049994

U2 - 10.4056/sigs.2525955

DO - 10.4056/sigs.2525955

M3 - Article

AN - SCOPUS:84859049994

SN - 1944-3277

VL - 6

SP - 43

EP - 53

JO - Standards in Genomic Sciences

JF - Standards in Genomic Sciences

IS - 1

ER -

Draft genome sequence of Arthrospira platensis C1 (PCC9438)

Abstract

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